Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11263 Psilostachyin C 264.1332 265.1404 224
P14345 Levetiracetam 170.1025 171.1105 224
P17555 Latrunculin C 397.1929 398.2009 224
P42432 Phthalsaurediethylhexylester 306.1820 613.3715 224
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 1006.5526 223
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 140.0688 222
P38156 Montanastatin 740.4093 741.4144 222
P41025 CDP-DG(i-15:0/20:4(5Z,8Z,11Z,13E)+=O(15)) 1001.4851 1002.4923 222
P06065 4-Toluenesulfonamide 171.0341 172.0404 221
P13789 (2S,3S)-3-Hydroxyasparagine 148.0485 149.0561 221

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G181100 hypothetical protein NA 17
Glyma.16G213300 hypothetical protein AT1G34130:STT3B:staurosporin and temperature sensitive 3-like b 17
Glyma.17G110000 hypothetical protein AT3G42180:AT3G42180:Exostosin family protein 17
Glyma.17G145900 hypothetical protein AT4G16820:PLA-I{beta]2:alpha/beta-Hydrolases superfamily protein 17
Glyma.18G045100 hypothetical protein AT1G65840:PAO4:polyamine oxidase 4 17
Glyma.18G213900 hypothetical protein AT3G08740:AT3G08740:elongation factor P (EF-P) family protein 17
Glyma.18G228300 hypothetical protein AT1G01920:AT1G01920:SET domain-containing protein 17
Glyma.18G228400 hypothetical protein AT5G35730:AT5G35730:EXS (ERD1/XPR1/SYG1) family protein 17
Glyma.18G237700 hypothetical protein AT4G01280:AT4G01280:Homeodomain-like superfamily protein 17
Glyma.18G274000 hypothetical protein AT5G38895:AT5G38895:RING/U-box superfamily protein 17