Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G214700 hypothetical protein AT1G72000:A/N-InvF:Plant neutral invertase family protein__AT1G22650:A/N-InvD:Plant neutral invertase family protein__AT4G09510:CINV2:cytosolic invertase 2 17
Glyma.11G228400 hypothetical protein AT2G40070:AT2G40070:flocculation FLO11-like protein 17
Glyma.14G094500 hypothetical protein NA 17
Glyma.14G172600 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 17
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 17
Glyma.15G141200 hypothetical protein AT3G17000:UBC32:ubiquitin-conjugating enzyme 32 17
Glyma.15G224400 hypothetical protein AT5G04940:SUVH1:SU(VAR)3-9 homolog 1 17
Glyma.16G027600 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 17
Glyma.16G073000 MYB181 MYB transcription factor MYB181 NA 17
Glyma.16G177400 hypothetical protein NA 17