Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P14703 Dillapional 236.0658 237.0736 195
P30058 Koraiol 222.1951 223.2018 195
P12116 o-Methylacetophenone 134.0716 135.0790 194
P16820 Petunidin 3-(6''-malonylglucoside) 564.1095 565.1176 194
P28303 Nannochelin B 754.3070 755.3117 194
P37556 807.4435 808.4480 194
P41491 677.8221 678.8305 194
P01926 Hyacinthacine A4 187.1208 188.1264 193
P06218 Repaglinide 452.2673 453.2779 193
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 432.1820 193

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.10G214700 hypothetical protein AT1G72000:A/N-InvF:Plant neutral invertase family protein__AT1G22650:A/N-InvD:Plant neutral invertase family protein__AT4G09510:CINV2:cytosolic invertase 2 17
Glyma.11G228400 hypothetical protein AT2G40070:AT2G40070:flocculation FLO11-like protein 17
Glyma.14G094500 hypothetical protein NA 17
Glyma.14G172600 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 17
Glyma.15G106000 hypothetical protein AT4G21760:BGLU47:beta-glucosidase 47 17
Glyma.15G141200 hypothetical protein AT3G17000:UBC32:ubiquitin-conjugating enzyme 32 17
Glyma.15G224400 hypothetical protein AT5G04940:SUVH1:SU(VAR)3-9 homolog 1 17
Glyma.16G027600 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 17
Glyma.16G073000 MYB181 MYB transcription factor MYB181 NA 17
Glyma.16G177400 hypothetical protein NA 17