Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P55548		347.3085	348.3149	—
P55550	16-Methylheptadecanoylcarnitine	427.3718	428.3783	—
P55555	Pro-Pro-Phe	359.1790	360.1862	—
P55556		273.9162	274.9238	—
P55557		177.9525	178.9596	—
P55558		127.9526	128.9604	—
P55560	Evodone	164.0824	329.1720	—
P55562	Isomytiloxanthin	598.4011	599.4090	—
P55563		108.0105	109.0176	—
P55565	(-)-Tetrodecamycin	334.1416	335.1503	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.05G126400	hypothetical protein	NA	862
Glyma.18G299100	hypothetical protein	AT5G13420:TRA2:Aldolase-type TIM barrel family protein	862
Glyma.16G210200	hypothetical protein	NA	855
Glyma.16G209900	hypothetical protein	NA	847
Glyma.16G115600	hypothetical protein	AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein	846
Glyma.14G068100	hypothetical protein	AT3G12550:FDM3:XH/XS domain-containing protein	844
Glyma.16G137600	hypothetical protein	NA	843
Glyma.16G115300	hypothetical protein	NA	842
Glyma.16G146300	hypothetical protein	NA	841
Glyma.04G084800	hypothetical protein	AT5G11630:NOXY2:uncharacterized protein	836