Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54778 8'-Hydroxy-3-methoxy isodiospyrin 420.0827 421.0871 —
P54779 beta-Doradecin 580.3892 581.3981 —
P54780 Pirenzepine 351.1705 352.1780 —
P54782 Tripeptide 549.2479 550.2541 —
P54783 16S-methyl-sphing-4-enine 313.2937 314.3018 —
P54784 D-Glucosyldihydrosphingosine 463.3451 464.3554 —
P54786 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2579 391.2624 —
P54788 17beta-Hydroxy-7alpha-methylandrost-4-en-3-one 302.2187 303.2265 —
P54790 Leucyl-Threonine 232.1438 233.1507 —
P54795 Foetisulfide A 224.0352 225.0433 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G126400 hypothetical protein NA 862
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 862
Glyma.16G210200 hypothetical protein NA 855
Glyma.16G209900 hypothetical protein NA 847
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 846
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 844
Glyma.16G137600 hypothetical protein NA 843
Glyma.16G115300 hypothetical protein NA 842
Glyma.16G146300 hypothetical protein NA 841
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 836