Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54650 Indane 118.0771 119.0836 —
P54653 N-(Sulfonatooxy)prop-2-enimidothioate 196.9830 197.9910 —
P54661 163.9741 164.9816 —
P54663 231.9051 232.9122 —
P54664 Kupitengester 1 637.2585 638.2677 —
P54665 6-Decenoylcarnitine 313.2232 627.4555 —
P54667 Tonapofylline 488.1209 489.1259 —
P54668 239.2316 240.2383 —
P54670 604.0611 605.0630 —
P54678 Calix[6]arene 636.2522 637.2633 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G126400 hypothetical protein NA 862
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 862
Glyma.16G210200 hypothetical protein NA 855
Glyma.16G209900 hypothetical protein NA 847
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 846
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 844
Glyma.16G137600 hypothetical protein NA 843
Glyma.16G115300 hypothetical protein NA 842
Glyma.16G146300 hypothetical protein NA 841
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 836