Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P54500		126.9627	127.9698	—
P54501	MITOGUAZONE	184.1167	185.1244	—
P54506		140.9526	141.9586	—
P54513		123.1119	124.1188	—
P54520		308.8758	309.8808	—
P54526	Lucidusculine	401.2586	402.2660	—
P54527	Taurocholic acid 3-sulfate	595.2481	596.2540	—
P54532	PE-NMe2(11D3/9D3)	823.5404	824.5486	—
P54534	Sulfur mustard	157.9693	158.9769	—
P54538	Cadalene	198.1403	199.1475	—

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.05G126400	hypothetical protein	NA	862
Glyma.18G299100	hypothetical protein	AT5G13420:TRA2:Aldolase-type TIM barrel family protein	862
Glyma.16G210200	hypothetical protein	NA	855
Glyma.16G209900	hypothetical protein	NA	847
Glyma.16G115600	hypothetical protein	AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein	846
Glyma.14G068100	hypothetical protein	AT3G12550:FDM3:XH/XS domain-containing protein	844
Glyma.16G137600	hypothetical protein	NA	843
Glyma.16G115300	hypothetical protein	NA	842
Glyma.16G146300	hypothetical protein	NA	841
Glyma.04G084800	hypothetical protein	AT5G11630:NOXY2:uncharacterized protein	836