Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54474 259.8976 260.9040 —
P54475 Merodesmosine 402.2539 403.2614 —
P54476 241.1912 242.1986 —
P54478 (S1)-Methoxy-3-heptanethiol 162.1063 163.1123 —
P54481 260.2066 261.2132 —
P54482 Kupitengester 1 637.2508 638.2612 —
P54485 GDC-0834 Racemate 596.2526 597.2585 —
P54491 251.9006 252.9092 —
P54494 135.0746 136.0817 —
P54495 531.6813 532.6882 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G126400 hypothetical protein NA 862
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 862
Glyma.16G210200 hypothetical protein NA 855
Glyma.16G209900 hypothetical protein NA 847
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 846
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 844
Glyma.16G137600 hypothetical protein NA 843
Glyma.16G115300 hypothetical protein NA 842
Glyma.16G146300 hypothetical protein NA 841
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 836