Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P12494 Oclacitinib 337.1591 338.1648 105
P12812 Hydroxy Bosentan 567.1812 568.1848 105
P16596 Hemiphroside A 668.2303 669.2386 105
P18987 Acetophenazine 411.1992 412.2057 105
P19530 109.0608 110.0680 105
P20848 Erismodegib 485.1994 486.2075 105
P21029 2-Hydroxyundec-3-enoyl-CoA 949.2613 950.2654 105
P23288 Methylthymol blue 756.2618 757.2683 105
P23412 N-Carboxyacetyl-D-phenylalanine 251.0785 252.0854 105
P24594 Rhizoxin 625.3279 626.3386 105

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G126400 hypothetical protein NA 862
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 862
Glyma.16G210200 hypothetical protein NA 855
Glyma.16G209900 hypothetical protein NA 847
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 846
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 844
Glyma.16G137600 hypothetical protein NA 843
Glyma.16G115300 hypothetical protein NA 842
Glyma.16G146300 hypothetical protein NA 841
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 836