Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P37898 Dechlorobarbamide 426.0942 427.1011 118
P42831 N-(33-(9Z,12Z-octadecadienoyloxy)-tritriacontanoyl)-heneicosasphinganine 1098.0490 1099.0581 118
P44498 PA(18:4(6Z,9Z,12Z,15Z)/20:4(5Z,8Z,11Z,14Z)-OH(19S)) 732.4399 733.4477 118
P46179 Kitamycin A 464.2157 465.2219 118
P46842 Aypgkf 681.3415 682.3472 118
P53532 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0636 238.0716 118
P02113 1H-1,4-Diazepine, hexahydro-1-((5-iodo-1-naphthalenyl)sulfonyl)- 416.0121 417.0190 117
P04168 2-Nitrophenyl acetate 181.0357 182.0441 117
P05831 2-Methacryloyloxyethyl phosphorylcholine 295.1190 296.1230 117
P08297 Asparenomycin A 340.0759 341.0847 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G126400 hypothetical protein NA 862
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 862
Glyma.16G210200 hypothetical protein NA 855
Glyma.16G209900 hypothetical protein NA 847
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 846
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 844
Glyma.16G137600 hypothetical protein NA 843
Glyma.16G115300 hypothetical protein NA 842
Glyma.16G146300 hypothetical protein NA 841
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 836