Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55446 1-(4-Hydroxyphenyl)-4,8-dimethyl-10-(2,6,6-trimethylcyclohexen-1-yl)deca-3,5,7,9-tetraen-2-one 390.2571 391.2651 —
P55448 Myrrhanol A 460.3838 461.3899 —
P55449 1-(3,4-Dichlorophenyl)urea 203.9825 204.9901 —
P55452 Flunixin 296.0745 297.0820 —
P55455 557.1670 558.1718 —
P55456 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1027 503.1103 —
P55458 Rosmadial 344.1611 345.1687 —
P55459 7-Methyl-6,8-bis(methylthio)pyrrolo(1,2-a)pyrazine 224.0408 225.0488 —
P55460 Propyl 1-(propylsulfinyl)propyl disulfide 240.0673 241.0731 —
P55461 Losmapimod 383.1986 384.2078 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G135100 hypothetical protein NA 17
Glyma.06G283200 hypothetical protein NA 17
Glyma.06G317000 hypothetical protein NA 17
Glyma.07G007400 hypothetical protein AT1G54270:EIF4A-2:eif4a-2__AT3G13920:EIF4A1:eukaryotic translation initiation factor 4A1__AT1G72730:AT1G72730:DEA(D/H)-box RNA helicase family protein 17
Glyma.08G120900 hypothetical protein AT1G29630:AT1G29630:5'-3' exonuclease family protein 17
Glyma.08G171900 hypothetical protein AT3G12950:AT3G12950:Trypsin family protein 17
Glyma.08G192000 hypothetical protein AT3G13790:ATBFRUCT1:Glycosyl hydrolases family 32 protein 17
Glyma.09G230700 hypothetical protein NA 17
Glyma.09G231600 hypothetical protein AT1G71692:AGL12:AGAMOUS-like 12 17
Glyma.10G005400 hypothetical protein AT5G46040:AT5G46040:Major facilitator superfamily protein 17