Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G108500 hypothetical protein AT1G69580:AT1G69580:Homeodomain-like superfamily protein 17
Glyma.02G303800 hypothetical protein AT3G20910:NF-YA9:nuclear factor Y, subunit A9 17
Glyma.04G023600 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 17
Glyma.04G044800 LBD16 LBD domain-containing transcription factor NA 17
Glyma.04G251500 hypothetical protein AT1G44835:AT1G44835:YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 17
Glyma.05G237500 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 17
Glyma.06G132800 hypothetical protein AT4G27680:AT4G27680:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT5G53540:AT5G53540:P-loop containing nucleoside triphosphate hydrolases superfamily protein 17
Glyma.06G133000 hypothetical protein NA 17
Glyma.06G133400 hypothetical protein AT5G53570:AT5G53570:Ypt/Rab-GAP domain of gyp1p superfamily protein 17
Glyma.06G133600 hypothetical protein NA 17