Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41899 Cycloshizukaol A 548.2461 549.2553 219
P49571 Olopatadine n-oxide 353.1566 354.1633 219
P03782 Kikumycin B 317.1599 318.1657 218
P08166 742.1240 743.1314 218
P20028 beta-D-Glucopyranosyl anthranilate 299.1011 300.1073 218
P22124 392.6469 393.6511 218
P27938 Peneciraistin C 398.1535 399.1601 218
P36141 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1684 401.1770 218
P36494 5-Hydroxy-1-methylpyrrolidin-2-one 115.0624 116.0694 218
P45909 222.1575 223.1662 218

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.02G108500 hypothetical protein AT1G69580:AT1G69580:Homeodomain-like superfamily protein 17
Glyma.02G303800 hypothetical protein AT3G20910:NF-YA9:nuclear factor Y, subunit A9 17
Glyma.04G023600 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 17
Glyma.04G044800 LBD16 LBD domain-containing transcription factor NA 17
Glyma.04G251500 hypothetical protein AT1G44835:AT1G44835:YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein 17
Glyma.05G237500 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 17
Glyma.06G132800 hypothetical protein AT4G27680:AT4G27680:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT5G53540:AT5G53540:P-loop containing nucleoside triphosphate hydrolases superfamily protein 17
Glyma.06G133000 hypothetical protein NA 17
Glyma.06G133400 hypothetical protein AT5G53570:AT5G53570:Ypt/Rab-GAP domain of gyp1p superfamily protein 17
Glyma.06G133600 hypothetical protein NA 17