Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55585 611.1724 612.1787 —
P55586 Cadiamine 282.1961 565.4004 —
P55587 248.9018 249.9090 —
P55589 Chromoionophore I 583.4124 584.4189 —
P55590 106.5089 107.5161 —
P55591 Gallamonum 423.3521 424.3614 —
P55592 9-Octadecenoic acid (9Z)-, (2-hydroxy-2-oxido-1,2-oxaphospholan-4-yl)methyl ester 416.2697 417.2779 —
P55593 627.2766 628.2811 —
P55596 Pyrido[2,3-d]pyrimidin-2(1H)-one, 4-cyclohexyl-1-ethyl-7-methyl- 271.1694 272.1771 —
P55599 423.3589 424.3642 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G057000 hypothetical protein NA 18
Glyma.19G119000 hypothetical protein AT5G17770:CBR:NADH:cytochrome B5 reductase 1 18
Glyma.19G247900 hypothetical protein AT5G28910:AT5G28910:alpha-(1,6)-fucosyltransferase 18
Glyma.20G065100 hypothetical protein AT2G22330:CYP79B3:cytochrome P450, family 79, subfamily B, polypeptide 3 18
Glyma.20G109700 hypothetical protein NA 18
Glyma.20G198400 hypothetical protein NA 18
Glyma.20G235300 hypothetical protein AT1G09060:AT1G09060:JmjC domain protein JMJ24 18
Glyma.02G060700 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 17
Glyma.02G065200 hypothetical protein NA 17
Glyma.02G105600 hypothetical protein NA 17