Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G057000 hypothetical protein NA 18
Glyma.19G119000 hypothetical protein AT5G17770:CBR:NADH:cytochrome B5 reductase 1 18
Glyma.19G247900 hypothetical protein AT5G28910:AT5G28910:alpha-(1,6)-fucosyltransferase 18
Glyma.20G065100 hypothetical protein AT2G22330:CYP79B3:cytochrome P450, family 79, subfamily B, polypeptide 3 18
Glyma.20G109700 hypothetical protein NA 18
Glyma.20G198400 hypothetical protein NA 18
Glyma.20G235300 hypothetical protein AT1G09060:AT1G09060:JmjC domain protein JMJ24 18
Glyma.02G060700 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 17
Glyma.02G065200 hypothetical protein NA 17
Glyma.02G105600 hypothetical protein NA 17