Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55501 TRIETHYLENE GLYCOL 150.0886 151.0965 —
P55504 242.8763 243.8834 —
P55505 278.8958 279.9028 —
P55506 Cycloaspeptide D 627.2976 628.3046 —
P55509 Insularine 2beta-N-oxide 636.2833 637.2873 —
P55518 116.9519 117.9590 —
P55519 4-Chloro-7-nitrobenzofurazan 198.9770 199.9844 —
P55520 236.8846 237.8918 —
P55521 Lupinine 169.1454 170.1523 —
P55523 Cefapime 462.1075 463.1113 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G120800 hypothetical protein AT5G47730:AT5G47730:Sec14p-like phosphatidylinositol transfer family protein 18
Glyma.15G121000 hypothetical protein NA 18
Glyma.15G125700 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 18
Glyma.15G152000 hypothetical protein NA 18
Glyma.15G257800 hypothetical protein NA 18
Glyma.16G172600 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 18
Glyma.16G181200 hypothetical protein NA 18
Glyma.18G004900 hypothetical protein NA 18
Glyma.18G284600 hypothetical protein AT1G24280:G6PD3:glucose-6-phosphate dehydrogenase 3__AT5G13110:G6PD2:glucose-6-phosphate dehydrogenase 2 18
Glyma.19G019100 hypothetical protein AT5G15070:AT5G15070:Phosphoglycerate mutase-like family protein 18