Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02752 Polanrazine B 377.1240 378.1297 180
P06961 Norhygrine 127.0981 128.1057 180
P10476 264.6079 265.6141 180
P10479 L-Arogenate 227.0795 228.0865 180
P12237 Siwanine A 505.2575 506.2645 180
P16337 Triphyllin A 656.2395 657.2469 180
P17370 Kosinostatin 616.2046 617.2161 180
P26964 688.2990 689.3077 180
P29279 Cyromazine 166.0980 167.1049 180
P30762 5,5-Dimethyl-1-ethyl-1,3-cyclopentadiene 122.1083 123.1160 180

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G120800 hypothetical protein AT5G47730:AT5G47730:Sec14p-like phosphatidylinositol transfer family protein 18
Glyma.15G121000 hypothetical protein NA 18
Glyma.15G125700 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 18
Glyma.15G152000 hypothetical protein NA 18
Glyma.15G257800 hypothetical protein NA 18
Glyma.16G172600 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 18
Glyma.16G181200 hypothetical protein NA 18
Glyma.18G004900 hypothetical protein NA 18
Glyma.18G284600 hypothetical protein AT1G24280:G6PD3:glucose-6-phosphate dehydrogenase 3__AT5G13110:G6PD2:glucose-6-phosphate dehydrogenase 2 18
Glyma.19G019100 hypothetical protein AT5G15070:AT5G15070:Phosphoglycerate mutase-like family protein 18