Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P26418	Antibiotic 273a1alpha	1112.3282	1113.3409	231
P30811		767.2566	768.2643	231
P04078		311.5769	312.5829	230
P14825	9R-hydroxy-2E,4E-decadienoic acid	184.1086	185.1164	230
P17592		175.1437	176.1505	230
P31714	4,4'-Dihydroxystilbene	212.0832	213.0898	230
P20017		343.2428	344.2506	229
P21903	Triptregeline H	611.2282	612.2377	229
P31991	Irroratin A	378.2030	379.2088	229
P26216	trans-2-Enoyl-OPC6-CoA	1013.2870	1014.2977	228

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Alias	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.07G007100		hypothetical protein	NA	18
Glyma.07G062300		hypothetical protein	AT2G46220:AT2G46220:DUF2358 family protein (DUF2358)	18
Glyma.08G107700	RHG4	receptor-like kinase RHG4	NA	18
Glyma.11G026700		hypothetical protein	AT1G63020:NRPD1A:nuclear RNA polymerase D1A	18
Glyma.12G079700		hypothetical protein	AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein	18
Glyma.12G185400		hypothetical protein	AT2G27480:AT2G27480:Calcium-binding EF-hand family protein	18
Glyma.13G250400	NES	nerol synthase	NA	18
Glyma.13G293800		hypothetical protein	NA	18
Glyma.15G024900		hypothetical protein	AT3G13780:AT3G13780:SMAD/FHA domain-containing protein	18
Glyma.15G025300		hypothetical protein	NA	18