Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G007100 hypothetical protein NA 18
Glyma.07G062300 hypothetical protein AT2G46220:AT2G46220:DUF2358 family protein (DUF2358) 18
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 18
Glyma.11G026700 hypothetical protein AT1G63020:NRPD1A:nuclear RNA polymerase D1A 18
Glyma.12G079700 hypothetical protein AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein 18
Glyma.12G185400 hypothetical protein AT2G27480:AT2G27480:Calcium-binding EF-hand family protein 18
Glyma.13G250400 NES nerol synthase NA 18
Glyma.13G293800 hypothetical protein NA 18
Glyma.15G024900 hypothetical protein AT3G13780:AT3G13780:SMAD/FHA domain-containing protein 18
Glyma.15G025300 hypothetical protein NA 18