Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P15527 (1S,4R)-passicapsin 417.1645 418.1754 214
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 759.2019 214
P04012 N2,N5-Diacetylornithine 216.1093 217.1155 213
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 713.1566 212
P48613 Emorfazone 239.1270 240.1348 212
P06958 Adafosbuvir 545.1626 546.1675 211
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 265.1498 211
P22693 Propanoic acid, 3-((((2-(1,1-dimethylethyl)-5-methoxy-6-benzothiazolyl)amino)thioxomethyl)thio)- 384.0657 385.0746 211
P34892 Aristolin 629.2974 630.3072 211
P37540 PA(19:2(10Z,13Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 748.4711 749.4768 211

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G007100 hypothetical protein NA 18
Glyma.07G062300 hypothetical protein AT2G46220:AT2G46220:DUF2358 family protein (DUF2358) 18
Glyma.08G107700 RHG4 receptor-like kinase RHG4 NA 18
Glyma.11G026700 hypothetical protein AT1G63020:NRPD1A:nuclear RNA polymerase D1A 18
Glyma.12G079700 hypothetical protein AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein 18
Glyma.12G185400 hypothetical protein AT2G27480:AT2G27480:Calcium-binding EF-hand family protein 18
Glyma.13G250400 NES nerol synthase NA 18
Glyma.13G293800 hypothetical protein NA 18
Glyma.15G024900 hypothetical protein AT3G13780:AT3G13780:SMAD/FHA domain-containing protein 18
Glyma.15G025300 hypothetical protein NA 18