Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Open full metabolite explorer

Metabolite ID	Candidate annotation	Deionized mass (Da)	Average m/z	Associated genes (overlap)
P41917	TMC 2A	570.2358	571.2433	228
P06434	Eupaglehnin F	400.1272	401.1362	227
P11873	9R-hydroxy-2E,4E-decadienoic acid	184.1090	185.1162	227
P37633	1-(1,3-Benzothiazol-2-yl)-1-(2,4-dimethylphenyl)ethanol	283.1071	284.1131	227
P55372	Pentaethylene glycol	238.1414	239.1497	227
P01910		284.5701	285.5766	226
P33196	10-Deacetyltaxol-7-xyloside	943.3493	944.3610	225
P51321	Aspernigrin B	456.1702	457.1741	225
P09334	1-(Pentafluorophenyl)propane	210.0481	211.0553	224
P10043		547.5963	548.6029	224

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Open full gene explorer

Gene ID	Description	Arabidopsis ortholog	Associated metabolites (overlap)
Glyma.01G181000	hypothetical protein	NA	18
Glyma.01G211800	hypothetical protein	NA	18
Glyma.03G028900	hypothetical protein	AT3G60730:AT3G60730:Plant invertase/pectin methylesterase inhibitor superfamily	18
Glyma.04G083600	hypothetical protein	NA	18
Glyma.04G086300	hypothetical protein	NA	18
Glyma.04G103800	hypothetical protein	NA	18
Glyma.06G135300	hypothetical protein	NA	18
Glyma.06G135400	hypothetical protein	NA	18
Glyma.06G190800	hypothetical protein	NA	18
Glyma.06G283600	hypothetical protein	NA	18