Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P31215 966.3363 967.3449 180
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 387.2002 180
P41095 423.3575 424.3622 180
P49211 Bamifylline 385.2106 386.2173 180
P06876 Lembyne A 342.0021 343.0076 179
P14986 N-(2-hydroxyhexadecanoyl)-sphinganine 555.5217 556.5296 179
P21946 999.3356 1000.3371 179
P23960 Upunaphenol N 934.2723 935.2842 179
P29027 Bazzanin J 492.0855 493.0949 179
P35945 475.1093 476.1172 179

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G145900 hypothetical protein NA 19
Glyma.16G160200 hypothetical protein NA 19
Glyma.17G007700 hypothetical protein NA 19
Glyma.18G042500 hypothetical protein NA 19
Glyma.18G130600 hypothetical protein NA 19
Glyma.19G026200 hypothetical protein AT5G39420:cdc2cAt:CDC2C 19
Glyma.20G124000 hypothetical protein AT1G15130:AT1G15130:Endosomal targeting BRO1-like domain-containing protein 19
Glyma.20G236700 hypothetical protein AT3G05545:AT3G05545:RING/U-box superfamily protein 19
Glyma.01G172500 hypothetical protein NA 18
Glyma.01G175700 hypothetical protein NA 18