Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00788 Tyrphostin B42 294.0991 295.1079 199
P07827 809.2516 810.2565 199
P14487 Yuzurimine E 429.2528 430.2610 199
P42503 121.9563 122.9631 199
P50354 Nodulisporic acid C2 701.4348 702.4409 199
P54402 Catuabine E 371.1815 372.1888 199
P26744 FR901537 507.1481 508.1541 198
P04642 Aminoacylase 536.2172 537.2249 197
P15145 Geodiamolide M 609.2125 610.2230 197
P33997 615.3757 616.3848 197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G213300 hypothetical protein AT4G27100:AT4G27100:Ypt/Rab-GAP domain of gyp1p superfamily protein 19
Glyma.13G189700 hypothetical protein AT5G07050:UMAMIT9:nodulin MtN21 /EamA-like transporter family protein 19
Glyma.13G200700 hypothetical protein NA 19
Glyma.14G033400 hypothetical protein AT3G22330:PMH2:putative mitochondrial RNA helicase 2 19
Glyma.14G043800 hypothetical protein NA 19
Glyma.14G048200 hypothetical protein NA 19
Glyma.15G191500 hypothetical protein AT1G30800:AT1G30800:Fasciclin-like arabinogalactan family protein 19
Glyma.15G212200 hypothetical protein AT1G16520:AT1G16520:interactor of constitutive active ROPs protein 19
Glyma.15G213600 hypothetical protein NA 19
Glyma.16G075600 hypothetical protein AT4G19450:AT4G19450:Major facilitator superfamily protein 19