Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55462 Schidigeragenin B 428.2908 429.2971 —
P55464 131.9595 132.9668 —
P55465 Medicagol 296.0316 297.0374 —
P55468 N-Desmethylzopiclone 374.0907 375.0977 —
P55469 Minwanensin 284.1634 285.1694 —
P55470 YM 47525 618.3033 619.3107 —
P55471 LysW-L-glutamyl 5-phosphate 356.0603 357.0673 —
P55474 Homoneoharringtonine 549.2443 550.2512 —
P55476 175.9825 176.9896 —
P55477 Ajugapantin A 550.2419 551.2490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G162600 hypothetical protein NA 19
Glyma.05G217700 hypothetical protein NA 19
Glyma.05G221700 hypothetical protein NA 19
Glyma.05G230700 hypothetical protein NA 19
Glyma.06G133800 hypothetical protein NA 19
Glyma.06G286400 hypothetical protein NA 19
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 19
Glyma.09G233700 hypothetical protein AT1G33430:AT1G33430:Galactosyltransferase family protein 19
Glyma.10G038600 hypothetical protein AT4G28540:CKL6:casein kinase I-like 6 19
Glyma.11G060700 hypothetical protein NA 19