Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24428 Talniflumate 414.0784 415.0855 205
P25466 Niazinin 343.1126 344.1185 205
P15762 Aristoloterpenate II 527.1950 528.2020 204
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 315.0931 203
P05821 Pandangolide 3 362.1408 363.1478 203
P12578 4E,6E-undecenal 166.1341 167.1417 203
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 692.3416 203
P53229 Leurubicin 656.2476 657.2525 203
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 497.1062 202
P39176 Microtoenin C 941.5023 942.5093 202

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G162600 hypothetical protein NA 19
Glyma.05G217700 hypothetical protein NA 19
Glyma.05G221700 hypothetical protein NA 19
Glyma.05G230700 hypothetical protein NA 19
Glyma.06G133800 hypothetical protein NA 19
Glyma.06G286400 hypothetical protein NA 19
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 19
Glyma.09G233700 hypothetical protein AT1G33430:AT1G33430:Galactosyltransferase family protein 19
Glyma.10G038600 hypothetical protein AT4G28540:CKL6:casein kinase I-like 6 19
Glyma.11G060700 hypothetical protein NA 19