Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G038100 hypothetical protein NA 20
Glyma.19G222200 hypothetical protein NA 20
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 20
Glyma.20G122300 hypothetical protein NA 20
Glyma.20G217600 hypothetical protein NA 20
Glyma.20G235400 hypothetical protein AT4G34910:AT4G34910:P-loop containing nucleoside triphosphate hydrolases superfamily protein 20
Glyma.02G115800 hypothetical protein AT3G45400:AT3G45400:exostosin family protein 19
Glyma.02G121600 hypothetical protein AT1G26310:CAL:K-box region and MADS-box transcription factor family protein 19
Glyma.02G125400 hypothetical protein AT1G68910:WIT2:WPP domain-interacting protein 2 19
Glyma.03G223300 hypothetical protein AT3G62190:AT3G62190:Chaperone DnaJ-domain superfamily protein 19