Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24140 Aristolindiquinone 218.0573 219.0638 183
P29594 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1242 427.1313 183
P36026 O-Phosphoviomycin 765.2885 766.2977 183
P37799 4-pregnene-17alpha,20beta,21-triol-3,11-dione 362.2054 363.2127 183
P38116 Leuphasyl 569.2841 570.2907 183
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 556.2481 183
P44241 Avermectin A2a monosaccharide 760.4380 761.4431 183
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 440.2339 183
P46875 2-Ethylhexyl 4-(dimethylamino)benzoate 277.2077 278.2165 183
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 265.1335 182

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.19G038100 hypothetical protein NA 20
Glyma.19G222200 hypothetical protein NA 20
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 20
Glyma.20G122300 hypothetical protein NA 20
Glyma.20G217600 hypothetical protein NA 20
Glyma.20G235400 hypothetical protein AT4G34910:AT4G34910:P-loop containing nucleoside triphosphate hydrolases superfamily protein 20
Glyma.02G115800 hypothetical protein AT3G45400:AT3G45400:exostosin family protein 19
Glyma.02G121600 hypothetical protein AT1G26310:CAL:K-box region and MADS-box transcription factor family protein 19
Glyma.02G125400 hypothetical protein AT1G68910:WIT2:WPP domain-interacting protein 2 19
Glyma.03G223300 hypothetical protein AT3G62190:AT3G62190:Chaperone DnaJ-domain superfamily protein 19