Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P52488 | Lignosulfonic acid | 490.0985 | 491.1080 | 143 |
| P54882 | 671.1545 | 672.1618 | 143 | |
| P55354 | Pulcherrimin E | 630.2454 | 631.2535 | 143 |
| P00694 | Stealthin C | 307.0854 | 308.0931 | 142 |
| P03711 | Monodictyochrome A | 566.1731 | 567.1841 | 142 |
| P03792 | Meridianin A | 226.0868 | 227.0936 | 142 |
| P09624 | 475.1174 | 476.1219 | 142 | |
| P12084 | N'-[2-(3,5-Difluorophenyl)-2-hydroxyacetyl]-2-ethyl-4-hydroxy-3-methylbenzohydrazide | 364.1264 | 365.1345 | 142 |
| P20838 | 2-Naphthalen-1-ylbutanoic acid | 214.0986 | 215.1051 | 142 |
| P20865 | Ethoxychelerythrine | 391.1430 | 392.1495 | 142 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 896 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 892 | |
| Glyma.16G025300 | hypothetical protein | NA | 890 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 887 | |
| Glyma.09G016800 | hypothetical protein | NA | 882 | |
| Glyma.12G183400 | hypothetical protein | NA | 879 | |
| Glyma.15G256300 | hypothetical protein | NA | 877 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 876 | |
| Glyma.16G114900 | hypothetical protein | NA | 874 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 863 |