Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P05438 | O-Methylisoalangiside | 519.2033 | 520.2093 | 103 |
| P06694 | 329.6590 | 330.6654 | 103 | |
| P09373 | 475.2201 | 476.2306 | 103 | |
| P11717 | 120.0197 | 121.0273 | 103 | |
| P12374 | Isobetanidin-6-O-beta-sophoroside | 712.1996 | 713.2056 | 103 |
| P16730 | 1123.3415 | 1124.3424 | 103 | |
| P17778 | 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid | 555.2364 | 556.2395 | 103 |
| P17815 | (-)-Fumiquinazoline H | 485.2036 | 486.2118 | 103 |
| P19938 | Majidine | 644.1728 | 645.1747 | 103 |
| P20777 | Huperzine T | 277.1657 | 278.1725 | 103 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 896 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 892 | |
| Glyma.16G025300 | hypothetical protein | NA | 890 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 887 | |
| Glyma.09G016800 | hypothetical protein | NA | 882 | |
| Glyma.12G183400 | hypothetical protein | NA | 879 | |
| Glyma.15G256300 | hypothetical protein | NA | 877 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 876 | |
| Glyma.16G114900 | hypothetical protein | NA | 874 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 863 |