Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22338 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1038 328.1106 113
P23965 327.2842 328.2896 113
P25505 Dracotanoside A 833.3882 834.3987 113
P27623 2,5-Diisopropyl-3-methylphenol 192.1485 193.1565 113
P28533 Ageratoside B1 988.4882 989.4915 113
P30593 GS-3 388.1637 389.1735 113
P32448 allo-Aromadendrane-10beta,14-diol 238.1913 239.1982 113
P34376 (E,E)-Geranyllinalool 290.2574 291.2657 113
P35307 Neoazedarachin A 616.3002 617.3063 113
P37634 Gualamycin 590.2188 591.2297 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 896
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 892
Glyma.16G025300 hypothetical protein NA 890
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 887
Glyma.09G016800 hypothetical protein NA 882
Glyma.12G183400 hypothetical protein NA 879
Glyma.15G256300 hypothetical protein NA 877
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 876
Glyma.16G114900 hypothetical protein NA 874
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 863