Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32267 Doronine 459.1717 460.1801 117
P34358 Genistein 7-O-glucuronide 446.0862 447.0907 117
P36094 Meehanine H 825.4180 826.4273 117
P36808 Decarbamoylgonyautoxin III 352.0799 353.0857 117
P39528 498.7220 499.7296 117
P41207 Volasertib 618.4025 619.4131 117
P41909 97.5037 98.5109 117
P41950 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1854 581.3797 117
P42108 alpha-Curcumene 202.1704 405.3482 117
P42124 987.5181 988.5281 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 896
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 892
Glyma.16G025300 hypothetical protein NA 890
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 887
Glyma.09G016800 hypothetical protein NA 882
Glyma.12G183400 hypothetical protein NA 879
Glyma.15G256300 hypothetical protein NA 877
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 876
Glyma.16G114900 hypothetical protein NA 874
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 863