Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P25734 | Potassium glycerophosphate | 200.0452 | 201.0523 | 120 |
| P25974 | 788.2214 | 789.2244 | 120 | |
| P26912 | 6,8-nonadienal | 138.1036 | 139.1103 | 120 |
| P29898 | SCH 42282 | 780.4610 | 781.4670 | 120 |
| P31333 | 222.1933 | 223.1996 | 120 | |
| P34206 | 958.3426 | 959.3560 | 120 | |
| P40857 | 5beta,6beta:22R,26-diepoxyergosta-4beta,19,27-trihydroxy-24-ene-1,26-dione 3beta-sulphate | 584.2307 | 585.2391 | 120 |
| P42445 | 4-Amino-3-hydroxybutanoylcarnitine | 262.1545 | 263.1625 | 120 |
| P42713 | 5-(3',4',5'-Trihydroxyphenyl)-gamma-valerolactone | 224.0681 | 225.0741 | 120 |
| P42727 | Methyl syramuraldehydate | 242.0783 | 243.0848 | 120 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 896 | |
| Glyma.16G025400 | hypothetical protein | AT2G46430:CNGC3:cyclic nucleotide gated channel 3 | 892 | |
| Glyma.16G025300 | hypothetical protein | NA | 890 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 887 | |
| Glyma.09G016800 | hypothetical protein | NA | 882 | |
| Glyma.12G183400 | hypothetical protein | NA | 879 | |
| Glyma.15G256300 | hypothetical protein | NA | 877 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 876 | |
| Glyma.16G114900 | hypothetical protein | NA | 874 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 863 |