Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54539 | Sophoraflavanone J | 650.2518 | 651.2584 | — |
| P54548 | (R)-6-(3-Methylpiperazin-1-yl)nicotinonitrile | 202.1257 | 203.1332 | — |
| P54552 | 119.0802 | 120.0872 | — | |
| P54557 | Styrene | 104.0616 | 105.0687 | — |
| P54565 | 257.2589 | 258.2663 | — | |
| P54569 | 128.9610 | 129.9684 | — | |
| P54571 | 1-(9Z-nonadecenoyl)-glycero-3-phosphate | 450.2730 | 451.2794 | — |
| P54575 | 109.0076 | 110.0149 | — | |
| P54581 | 360.8103 | 361.8184 | — | |
| P54587 | 3-Methoxy-19-norpregna-1,3,5(10)-trien-20-one | 312.2077 | 313.2144 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 4,293 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 4,037 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 3,822 | |
| Glyma.12G202300 | hypothetical protein | NA | 3,817 | |
| Glyma.05G127500 | hypothetical protein | NA | 3,663 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 3,582 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 3,568 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 3,568 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3,548 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 3,529 |