Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54337 Cadiamine 282.1953 283.2028 —
P54341 Pluramycin A 772.3531 773.3602 —
P54342 3-(4-(2-Dimethylamino-1-methylethoxy)phenyl)-1H-pyrazolo(3,4-b)pyridine-1-acetic acid 354.1738 355.1809 —
P54345 Linoleylanilide 355.2937 356.3000 —
P54347 6-octenal 126.1041 127.1111 —
P54349 2-Hydroxypent-3-enenitrile 97.0538 98.0612 —
P54350 Fomlactone A 526.3655 527.3736 —
P54351 3beta,11alpha-Diacetoxy-12-ursene 526.4095 527.4128 —
P54354 623.2567 624.2633 —
P54363 (+)-Acutifolin A 326.1510 327.1617 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 4,293
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 4,037
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 3,822
Glyma.12G202300 hypothetical protein NA 3,817
Glyma.05G127500 hypothetical protein NA 3,663
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 3,582
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 3,568
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 3,568
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3,548
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 3,529