Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54104 | 3-Deoxyestrone | 254.1632 | 255.1704 | — |
| P54106 | 432.7419 | 433.7480 | — | |
| P54111 | 9R-hydroxy-2E,4E-decadienoic acid | 184.1093 | 185.1159 | — |
| P54112 | 352.8207 | 353.8284 | — | |
| P54114 | 180.9669 | 181.9745 | — | |
| P54116 | 356.8340 | 357.8414 | — | |
| P54117 | Chlovalicin | 332.1393 | 333.1472 | — |
| P54119 | Litsenolide C1 | 310.2467 | 311.2532 | — |
| P54121 | 6-O-Glc-paromamine | 485.2244 | 486.2324 | — |
| P54125 | Agrimol F | 640.2606 | 641.2687 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 4,293 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 4,037 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 3,822 | |
| Glyma.12G202300 | hypothetical protein | NA | 3,817 | |
| Glyma.05G127500 | hypothetical protein | NA | 3,663 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 3,582 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 3,568 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 3,568 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3,548 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 3,529 |