Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26553 CD 1790 473.2195 474.2258 97
P27525 Burkinabin B 492.1288 493.1343 97
P29651 Destruxin E diol 611.3514 612.3581 97
P30726 Styrene 104.0616 105.0691 97
P31878 Stryspinolactone 272.0872 273.0951 97
P34787 Thiocyanatin E1 374.2072 375.2156 97
P34966 Cernuine 262.2014 263.2082 97
P35108 Protoverine 525.2899 526.2966 97
P41286 4-Hydroxytrideca-7,10-dienoylcarnitine 369.2541 370.2637 97
P41726 PA(8:0/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 640.3355 641.3461 97

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 4,293
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 4,037
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 3,822
Glyma.12G202300 hypothetical protein NA 3,817
Glyma.05G127500 hypothetical protein NA 3,663
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 3,582
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 3,568
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 3,568
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3,548
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 3,529