Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41500 2-Isopropylfuran 110.0721 221.1512 100
P44096 2,4-Diamino-6-dimethylamino-1,3,5-triazine 154.0975 309.2029 100
P48025 Isocitral 152.1188 305.2436 100
P48657 6E,11Z-hexadecadien-1-ol 238.2269 239.2334 100
P55136 Dictyopterene C' 150.1394 151.1472 100
P12435 Gliovictin 354.1082 355.1158 99
P13123 4-Amino-4-deoxychorismate 225.0629 226.0705 99
P13911 Fisetinidol-(4alpha->8)-catechin-3-O-gallate 714.1565 715.1685 99
P14786 1194.3970 1195.4059 99
P16774 3-Methylphenylacetic acid 150.0687 151.0766 99

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 4,293
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 4,037
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 3,822
Glyma.12G202300 hypothetical protein NA 3,817
Glyma.05G127500 hypothetical protein NA 3,663
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 3,582
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 3,568
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 3,568
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3,548
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 3,529