Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07022 Melrosin A 476.1705 477.1753 106
P10935 Acorafloxacin 419.1693 420.1730 106
P11923 Tyr-Val-Ala-Asp-chloromethyl ketone 498.1859 499.1895 106
P13185 N-Acetyl-serylaspartic acid 262.0810 263.0892 106
P16218 905.4256 906.4362 106
P16647 Loquatoside 438.1138 439.1203 106
P16934 405.5674 406.5711 106
P17618 Isopropyl phenylacetate 178.0981 179.1063 106
P17737 4'-Hydroxy-4-(4-hydroxystyryl)-7-methoxyflavan 374.1455 375.1552 106
P18372 N-Acetylphenylalanine beta-naphthyl ester 333.1364 334.1448 106

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 4,293
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 4,037
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 3,822
Glyma.12G202300 hypothetical protein NA 3,817
Glyma.05G127500 hypothetical protein NA 3,663
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 3,582
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 3,568
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 3,568
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3,548
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 3,529