Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.14G072600 hypothetical protein NA 20
Glyma.15G212600 hypothetical protein NA 20
Glyma.16G078200 hypothetical protein AT3G21600:AT3G21600:Senescence/dehydration-associated protein-like protein 20
Glyma.16G093700 hypothetical protein NA 20
Glyma.16G094500 hypothetical protein AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc 20
Glyma.16G095100 hypothetical protein AT1G32080:LrgB:uncharacterized protein 20
Glyma.16G164800 hypothetical protein NA 20
Glyma.17G112200 hypothetical protein AT5G52580:AT5G52580:RabGAP/TBC domain-containing protein 20
Glyma.17G251300 hypothetical protein AT1G19520:NFD5:pentatricopeptide (PPR) repeat-containing protein 20
Glyma.18G026200 hypothetical protein AT2G40150:TBL28:TRICHOME BIREFRINGENCE-LIKE 28__AT3G55990:ESK1:trichome birefringence-like protein (DUF828) 20