Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55548 347.3085 348.3149 —
P55550 16-Methylheptadecanoylcarnitine 427.3718 428.3783 —
P55555 Pro-Pro-Phe 359.1790 360.1862 —
P55556 273.9162 274.9238 —
P55557 177.9525 178.9596 —
P55558 127.9526 128.9604 —
P55560 Evodone 164.0824 329.1720 —
P55562 Isomytiloxanthin 598.4011 599.4090 —
P55563 108.0105 109.0176 —
P55565 (-)-Tetrodecamycin 334.1416 335.1503 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.07G077900 hypothetical protein NA 20
Glyma.07G096100 hypothetical protein AT1G25390:AT1G25390:Protein kinase superfamily protein 20
Glyma.07G202300 IFS1 isoflavone synthase 1 NA 20
Glyma.08G148100 hypothetical protein AT1G78570:RHM1:rhamnose biosynthesis 1 20
Glyma.08G191900 hypothetical protein AT3G13784:CWINV5:cell wall invertase 5 20
Glyma.08G328500 hypothetical protein NA 20
Glyma.08G350900 hypothetical protein AT3G25030:AT3G25030:RING/U-box superfamily protein__AT3G07120:AT3G07120:RING/U-box superfamily protein 20
Glyma.10G229000 hypothetical protein NA 20
Glyma.13G164300 hypothetical protein NA 20
Glyma.13G168300 hypothetical protein AT5G20110:AT5G20110:Dynein light chain type 1 family protein 20