Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55418 216.8746 217.8826 —
P55419 (+)-Neoacrimarine-H 567.1910 568.1955 —
P55425 N-[(2S)-3-[4-[2-(5-Methyl-2-phenyl-1,3-oxazol-4-yl)ethoxy]phenyl]-2-[[(Z)-4-oxo-4-[4-(trifluoromethyl)phenyl]but-2-en-2-yl]amino]propyl]propanamide 619.2572 620.2615 —
P55430 Tricornoside D 536.1464 537.1540 —
P55431 Luteolin 7-(2''-glucosyllactate) 520.1280 521.1380 —
P55433 24-ethyl-5alpha-cholest-25-en-3alpha,12alpha,16alpha-triol 446.3686 447.3753 —
P55434 Foetisulfide A 224.0393 225.0460 —
P55435 Butyl-meta-cycloheptylprodiginine 391.2601 392.2651 —
P55439 (4S*,6S*)-Dihydroxy-6-(14'Z-nonadecenyl)-2-cyclohexenone 392.3353 393.3424 —
P55441 538.1411 539.1490 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 21
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 21
Glyma.16G112800 hypothetical protein AT1G30590:AT1G30590:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G34750:AT2G34750:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G39240:AT2G39240:RNA polymerase I specific transcription initiation factor RRN3 protein 21
Glyma.16G112900 hypothetical protein AT5G65950:AT5G65950:trafficking protein particle complex subunit-like protein 21
Glyma.16G218700 hypothetical protein AT5G22110:DPB2:DNA polymerase epsilon subunit B2 21
Glyma.18G040000 GAI AT1G66350:RGL1:RGA-like 1__AT3G03450:RGL2:RGA-like 2 21
Glyma.18G107800 hypothetical protein AT1G06500:AT1G06500:uncharacterized protein 21
Glyma.18G108000 hypothetical protein NA 21
Glyma.18G205800 H-1 ferritin light chain AT5G01600:FER1:ferretin 1 21
Glyma.19G248000 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 21