Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 21
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 21
Glyma.16G112800 hypothetical protein AT1G30590:AT1G30590:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G34750:AT2G34750:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G39240:AT2G39240:RNA polymerase I specific transcription initiation factor RRN3 protein 21
Glyma.16G112900 hypothetical protein AT5G65950:AT5G65950:trafficking protein particle complex subunit-like protein 21
Glyma.16G218700 hypothetical protein AT5G22110:DPB2:DNA polymerase epsilon subunit B2 21
Glyma.18G040000 GAI AT1G66350:RGL1:RGA-like 1__AT3G03450:RGL2:RGA-like 2 21
Glyma.18G107800 hypothetical protein AT1G06500:AT1G06500:uncharacterized protein 21
Glyma.18G108000 hypothetical protein NA 21
Glyma.18G205800 H-1 ferritin light chain AT5G01600:FER1:ferretin 1 21
Glyma.19G248000 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 21