Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P00788 Tyrphostin B42 294.0991 295.1079 199
P07827 809.2516 810.2565 199
P14487 Yuzurimine E 429.2528 430.2610 199
P42503 121.9563 122.9631 199
P50354 Nodulisporic acid C2 701.4348 702.4409 199
P54402 Catuabine E 371.1815 372.1888 199
P26744 FR901537 507.1481 508.1541 198
P04642 Aminoacylase 536.2172 537.2249 197
P15145 Geodiamolide M 609.2125 610.2230 197
P33997 615.3757 616.3848 197

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 21
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 21
Glyma.16G112800 hypothetical protein AT1G30590:AT1G30590:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G34750:AT2G34750:RNA polymerase I specific transcription initiation factor RRN3 protein__AT2G39240:AT2G39240:RNA polymerase I specific transcription initiation factor RRN3 protein 21
Glyma.16G112900 hypothetical protein AT5G65950:AT5G65950:trafficking protein particle complex subunit-like protein 21
Glyma.16G218700 hypothetical protein AT5G22110:DPB2:DNA polymerase epsilon subunit B2 21
Glyma.18G040000 GAI AT1G66350:RGL1:RGA-like 1__AT3G03450:RGL2:RGA-like 2 21
Glyma.18G107800 hypothetical protein AT1G06500:AT1G06500:uncharacterized protein 21
Glyma.18G108000 hypothetical protein NA 21
Glyma.18G205800 H-1 ferritin light chain AT5G01600:FER1:ferretin 1 21
Glyma.19G248000 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 21