Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55566 Boceprevir 519.3459 520.3522 —
P55567 114.9560 115.9638 —
P55568 134.9625 135.9704 —
P55569 Cyromazine 166.0977 167.1054 —
P55570 232.8916 233.8992 —
P55573 609.1749 610.1805 —
P55575 Tebufelone 300.2051 601.4175 —
P55578 333.8152 334.8227 —
P55579 259.8976 260.9052 —
P55580 253.9070 254.9140 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G122600 hypothetical protein AT2G01130:AT2G01130:DEA(D/H)-box RNA helicase family protein 22
Glyma.01G047300 hypothetical protein AT1G27090:AT1G27090:glycine-rich protein 21
Glyma.01G047500 hypothetical protein NA 21
Glyma.03G042300 hypothetical protein NA 21
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 21
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 21
Glyma.06G091500 hypothetical protein NA 21
Glyma.06G203800 hypothetical protein NA 21
Glyma.06G275900 hypothetical protein NA 21
Glyma.06G319500 hypothetical protein NA 21