Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55273 Cistanoside D 652.2406 653.2558 —
P55274 Clobenzorex 259.1142 260.1207 —
P55275 609.7594 610.7622 —
P55277 Tiegusanin I 570.2441 571.2512 —
P55281 607.8298 608.8337 —
P55282 Difluprednate 508.2267 509.2321 —
P55283 Aerobactin 564.2307 565.2395 —
P55284 Boletocrocin B 499.2284 500.2320 —
P55285 Nicotaxine 555.2530 556.2628 —
P55289 608.8615 609.8654 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G122600 hypothetical protein AT2G01130:AT2G01130:DEA(D/H)-box RNA helicase family protein 22
Glyma.01G047300 hypothetical protein AT1G27090:AT1G27090:glycine-rich protein 21
Glyma.01G047500 hypothetical protein NA 21
Glyma.03G042300 hypothetical protein NA 21
Glyma.04G064300 Tyrosyl-DNA phosphodiesterase 1 AT5G15170:TDP1:tyrosyl-DNA phosphodiesterase-like protein 21
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 21
Glyma.06G091500 hypothetical protein NA 21
Glyma.06G203800 hypothetical protein NA 21
Glyma.06G275900 hypothetical protein NA 21
Glyma.06G319500 hypothetical protein NA 21