Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.17G007300 hypothetical protein AT4G16440:NAR1:ferredoxin hydrogenase 22
Glyma.17G062700 hypothetical protein AT3G02920:RPA32B:Replication protein A, subunit RPA32 22
Glyma.17G213300 hypothetical protein NA 22
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 22
Glyma.18G195000 hypothetical protein NA 22
Glyma.18G243300 hypothetical protein AT3G24090:GFAT:putative glucosamine-fructose-6-phosphate aminotransferase 22
Glyma.19G125600 hypothetical protein AT1G65440:GTB1:global transcription factor group B1 22
Glyma.19G126500 hypothetical protein AT2G40930:UBP5:ubiquitin-specific protease 5 22
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 22
Glyma.20G103800 hypothetical protein AT3G59040:AT3G59040:Tetratricopeptide repeat (TPR)-like superfamily protein 22