Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55524 Triphenyl phosphate 326.0699 327.0759 —
P55527 583.4623 584.4696 —
P55529 282.6336 283.6414 —
P55535 (5Z)-3-decanoyloxy-dodecenoic acid 368.2867 369.2942 —
P55536 IM-2 188.1076 189.1141 —
P55538 TRIMELLITIC ANHYDRIDE 192.0027 193.0100 —
P55539 3-Acetoxy-hexadecanoic acid 314.2449 315.2510 —
P55543 258.8918 259.8994 —
P55544 Dovyalicin F 407.2564 408.2631 —
P55546 138.9783 139.9860 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124300 hypothetical protein NA 22
Glyma.16G093800 hypothetical protein NA 22
Glyma.16G094200 hypothetical protein NA 22
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 22
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 22
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 22
Glyma.16G153700 hypothetical protein AT3G03870:AT3G03870:uncharacterized protein 22
Glyma.16G167500 hypothetical protein NA 22
Glyma.16G208700 hypothetical protein AT5G26360:AT5G26360:TCP-1/cpn60 chaperonin family protein 22
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 22