Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55395 407.3585 408.3657 —
P55396 (2E)-4-Hydroxyhexadecenoylcarnitine 413.3150 414.3221 —
P55398 Guangsangon M 610.1764 611.1829 —
P55399 5-Oxooctyl glucosinolate 445.1089 446.1162 —
P55401 Saligcinnamide 490.3950 491.4025 —
P55402 Myobontioside B 554.1645 555.1716 —
P55405 Cer(d17:1/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 627.4861 628.4955 —
P55407 Dibutylphthalic acid 278.1498 279.1577 —
P55414 Terminamine C 632.4352 633.4429 —
P55417 621.2630 622.2681 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G124300 hypothetical protein NA 22
Glyma.16G093800 hypothetical protein NA 22
Glyma.16G094200 hypothetical protein NA 22
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 22
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 22
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 22
Glyma.16G153700 hypothetical protein AT3G03870:AT3G03870:uncharacterized protein 22
Glyma.16G167500 hypothetical protein NA 22
Glyma.16G208700 hypothetical protein AT5G26360:AT5G26360:TCP-1/cpn60 chaperonin family protein 22
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 22