Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06381 6',7'-Dihydroxybergamottin 372.1547 373.1621 162
P06792 Myo-inositol glutamate 323.0859 324.0925 162
P10166 Demeton-O 258.0513 259.0583 162
P11723 Isomagnolol 266.1356 267.1438 162
P14158 Physalien 650.1559 651.1582 162
P21337 3-(9-Adeninyl)propionic acid. 207.0794 208.0868 162
P32513 Cefbuperazone 627.1640 628.1696 162
P41353 Deoxyharringtonine 515.2462 516.2526 162
P41829 Renieramycin R 605.2383 606.2458 162
P49182 Noberastine 311.1785 312.1827 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G009400 hypothetical protein AT3G59980:AT3G59980:Nucleic acid-binding, OB-fold-like protein 22
Glyma.12G019500 hypothetical protein AT1G51405:AT1G51405:myosin-like protein 22
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 22
Glyma.12G021500 hypothetical protein AT1G50450:AT1G50450:Saccharopine dehydrogenase 22
Glyma.12G023500 hypothetical protein AT4G38810:AT4G38810:Calcium-binding EF-hand family protein 22
Glyma.12G025600 hypothetical protein AT5G23210:SCPL34:serine carboxypeptidase-like 34 22
Glyma.12G026400 hypothetical protein AT5G23140:NCLPP7:nuclear-encoded CLP protease P7 22
Glyma.13G053300 hypothetical protein NA 22
Glyma.13G353500 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit__AT1G51980:AT1G51980:Insulinase (Peptidase family M16) protein 22
Glyma.15G103300 hypothetical protein AT3G06170:AT3G06170:Serinc-domain containing serine and sphingolipid biosynthesis protein 22