Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11263 Psilostachyin C 264.1332 265.1404 224
P14345 Levetiracetam 170.1025 171.1105 224
P17555 Latrunculin C 397.1929 398.2009 224
P42432 Phthalsaurediethylhexylester 306.1820 613.3715 224
P40215 CDP-DG(i-18:0/18:2(9Z,11Z)) 1005.5413 1006.5526 223
P07094 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0620 140.0688 222
P38156 Montanastatin 740.4093 741.4144 222
P41025 CDP-DG(i-15:0/20:4(5Z,8Z,11Z,13E)+=O(15)) 1001.4851 1002.4923 222
P06065 4-Toluenesulfonamide 171.0341 172.0404 221
P13789 (2S,3S)-3-Hydroxyasparagine 148.0485 149.0561 221

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.12G009400 hypothetical protein AT3G59980:AT3G59980:Nucleic acid-binding, OB-fold-like protein 22
Glyma.12G019500 hypothetical protein AT1G51405:AT1G51405:myosin-like protein 22
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 22
Glyma.12G021500 hypothetical protein AT1G50450:AT1G50450:Saccharopine dehydrogenase 22
Glyma.12G023500 hypothetical protein AT4G38810:AT4G38810:Calcium-binding EF-hand family protein 22
Glyma.12G025600 hypothetical protein AT5G23210:SCPL34:serine carboxypeptidase-like 34 22
Glyma.12G026400 hypothetical protein AT5G23140:NCLPP7:nuclear-encoded CLP protease P7 22
Glyma.13G053300 hypothetical protein NA 22
Glyma.13G353500 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit__AT1G51980:AT1G51980:Insulinase (Peptidase family M16) protein 22
Glyma.15G103300 hypothetical protein AT3G06170:AT3G06170:Serinc-domain containing serine and sphingolipid biosynthesis protein 22